BIOBASE Proteome and HGMD

BIOBASE PROTEOME

BIOBASE Proteome includes tools for gene set analysis and pathway visualization:

  • search for individual gene, disease, and drug reports by name
  • browse for sets of genes, diseases, and drugs which share a desired set of characteristics
  • upload a list of genes and identify those characteristics which are statistically over-represented
  • export annotated characteristics for a gene list
  • build and visualize protein-protein networks, overlaid with disease and drug assignments
  • annotate custom sequences

BIOBASE HGMD provides data on inherited human gene mutations that:

  • are known to be associated with a particular gene or disease
  • disrupt a splice donor or acceptor site, or
  • result in a specific amino acid change.

Proteome/HGMD Workshops: Katherine Wendelsdorf, Ph.D., QIAGEN/BIOBASE Senior Scientist, will be presenting hands-on training workshops on Proteome and HGMD:

Date: Thursday, October 29, 2015
Time: 11:00 am – 12:00 pm (Proteome); 12:00 – 1:00 pm (HGMD)
Location: Bioscience Library Training Room, 2189 VLSB

The workshops are open to all interested researchers. If you are interested in attending, please let us know.

Questions? Please contact bios@library.berkeley.edu